Week 3 [Fri, Aug 20th] - Topics

Branching is the process of evolving multiple versions of the software in parallel. For example, one team member can create a new branch and add an experimental feature to it while the rest of the team keeps working on another branch. Branches can be given names e.g. master, release, dev.

A branch can be merged into another branch. Merging usually results in a new commit that represents the changes done in the branch being merged.

Branching and merging

Merge conflicts happen when you try to merge two branches that had changed the same part of the code and the RCS cannot decide which changes to keep. In those cases, you have to ‘resolve’ the conflicts manually.

Git supports branching, which allows you to do multiple parallel changes to the content of a repository.

A Git branch is simply a named label pointing to a commit. The HEAD label indicates which branch you are on. Git creates a branch named master by default. When you add a commit, it goes into the branch you are currently on, and the branch label (together with the HEAD label) moves to the new commit.

Given below is an illustration of how branch labels move as branches evolve.

1. There is only one branch (i.e., master) and there is only one commit on it.
2. A new commit has been added. The master and the HEAD labels have moved to the new commit.
3. A new branch fix1 has been added. The repo has switched to the new branch too (hence, the HEAD label is attached to the fix1 branch).
4. A new commit (c) has been added. The current branch label fix1 moves to the new commit, together with the HEAD label.
5. The repo has switched back to the master branch.

6. A new commit (d) has been added. The master label has moved to that commit.
7. The repo has switched back to the fix1 branch and added a new commit (e) to it.
8. The repo has switched to the master branch and the fix1 branch has been merged into the master branch, creating a merge commit f. The repo is currently on the master branch.

Follow the steps below to learn how to work with branches. You can use any repo you have on your computer (e.g. a clone of the samplerepo-things) for this.

0. Observe that you are normally in the branch called master.

SourceTree

---

CLI

git status

on branch master

---

1. Start a branch named feature1 and switch to the new branch.

SourceTree

Click on the Branch button on the main menu. In the next dialog, enter the branch name and click Create Branch.

Note how the feature1 is indicated as the current branch.

---

CLI

You can use the branch command to create a new branch and the checkout command to switch to a specific branch.

git branch feature1
git checkout feature1

One-step shortcut to create a branch and switch to it at the same time:

git checkout –b feature1

---

2. Create some commits in the new branch. Just commit as per normal. Commits you add while on a certain branch will become part of that branch.
Note how the master label and the HEAD label moves to the new commit (The HEAD label of the local repo is represented as in SourceTree).

3. Switch to the master branch. Note how the changes you did in the feature1 branch are no longer in the working directory.

SourceTree

Double-click the master branch.

---

CLI

git checkout master

---

4. Add a commit to the master branch. Let’s imagine it’s a bug fix.
To keep things simple for the time being, this commit should not involve the same content that you changed in the feature1 branch. To be on the safe side, this commit can change an entirely different file.

5. Switch back to the feature1 branch (similar to step 3).

6. Merge the master branch to the feature1 branch, giving an end-result like the following. Also note how Git has created a merge commit.

git merge master

The objective of that merge was to sync the feature1 branch with the master branch. Observe how the changes you did in the master branch (i.e. the imaginary bug fix) is now available even when you are in the feature1 branch.

7. Add another commit to the feature1 branch.

8. Switch to the master branch and add one more commit.

9. Merge feature1 to the master branch, giving and end-result like this:

git merge feature1

10. Create a new branch called add-countries, switch to it, and add some commits to it (similar to steps 1-2 above). You should have something like this now:

11. Go back to the master branch and merge the add-countries branch onto the master branch (similar to steps 8-9 above). While you might expect to see something like the following,

... you are likely to see something like this instead:

That is because Git does a fast forward merge if possible. Seeing that the master branch has not changed since you started the add-countries branch, Git has decided it is simpler to just put the commits of the add-countries branch in front of the master branch, without going into the trouble of creating an extra merge commit.

It is possible to force Git to create a merge commit even if fast forwarding is possible.

SourceTree

Tick the box shown below when you merge a branch:

---

CLI

Use the --no-ff switch (short for no fast forward):

git merge --no-ff add-countries

---

Pushing a branch to a remote repo

Here's how to push a branch to a remote repo:

SourceTree

Here's how to push a branch named add-intro to your own fork of a repo named samplerepo-pr-practice:

---

CLI

Normally: git push {remote repository} {branch}. Examples:

• git push origin master pushes the master branch to the repo named origin (i.e., the repo you cloned from)
• git push upstream-repo add-intro pushes the add-intro branch to the repo named upstream-repo

If pushing a branch you created locally to the remote for the first time, add the -u flag to get the local branch to track the new upstream branch:
e.g., git push -u origin add-intro

See git-scm.com/docs/git-push for details of the push command.

---

Merge conflicts happen when you try to combine two incompatible versions (e.g., merging a branch to another but each branch changed the same part of the code in a different way).

Here are the steps to simulate a merge conflict and use it to learn how to resolve merge conflicts.

0. Create an empty repo or clone an existing repo, to be used for this activity.

1. Start a branch named fix1 in the repo. Create a commit that adds a line with some text to one of the files.

2. Switch back to master branch. Create a commit with a conflicting change i.e. it adds a line with some different text in the exact location the previous line was added.

3. Try to merge the fix1 branch onto the master branch. Git will pause mid-way during the merge and report a merge conflict. If you open the conflicted file, you will see something like this:

COLORS
------
blue
<<<<<< HEAD
black
=======
green
>>>>>> fix1
red
white

4. Observe how the conflicted part is marked between a line starting with <<<<<< and a line starting with >>>>>>, separated by another line starting with =======.

Highlighted below is the conflicting part that is coming from the master branch:

blue
<<<<<< HEAD
black
=======
green
>>>>>> fix1
red

This is the conflicting part that is coming from the fix1 branch:

blue
<<<<<< HEAD
black
=======
green
>>>>>> fix1
red

5. Resolve the conflict by editing the file. Let us assume you want to keep both lines in the merged version. You can modify the file to be like this:

COLORS
------
blue
black
green
red
white

6. Stage the changes, and commit.

Suppose you want to propose some changes to a GitHub repo (e.g., samplerepo-pr-practice) as a pull request (PR). Here is a scenario you can try in order to learn how to create PRs:

1. Fork the repo onto your GitHub account.

2. Clone it onto your computer.

3. Commit your changes e.g., add a new file with some contents and commit it.

• Option A - Commit changes to the master branch
• Option B - Commit to a new branch e.g., create a branch named add-intro (remember to switch to the master branch before creating a new branch) and add your commit to it.

4. Push the branch you updated (i.e., master branch or the new branch) to your fork, as explained here.

5. Initiate the PR creation:

1. Go to your fork.

2. Click on the Pull requests tab followed by the New pull request button. This will bring you to the 'Comparing changes' page.

3. Set the appropriate target repo and the branch that should receive your PR, using the base repository and base dropdowns. e.g.,
   base repository: se-edu/samplerepo-pr-practice base: master
   

   Normally, the default value shown in the dropdown is what you want but in case your fork has e.g., the repo you forked from is also a fork of a another repo, which means both of those are considered upstream repos of your forkmultiple upstream repos, the default may not be what you want.

4. Indicate which repo:branch contains your proposed code, using the head repository and compare dropdowns. e.g.,
   head repository: myrepo/samplerepo-pr-practice compare: master
   

6. Verify the proposed code: Verify that the diff view in the page shows the exact change you intend to propose. If it doesn't, commit the new code and push to the branchupdate the branch as necessary.

7. Submit the PR:

The next step of the PR life cycle is the PR review. The members of the repo that received your PR can now review your proposed changes.

• If they like the changes, they can merge the changes to their repo, which also closes the PR automatically.
• If they don't like it at all, they can simply close the PR too i.e., they reject your proposed change.
• In most cases, they will add comments to the PR to suggest further changes. When that happens, GitHub will notify you.

You can update the PR along the way too. Suppose PR reviewers suggested a certain improvement to your proposed code. To update your PR as per the suggestion, you can simply modify the code in your local repo, commit the updated code to the same master branch, and push to your fork as you did earlier. The PR will auto-update accordingly.

Sending PRs using the master branch is less common than sending PRs using separate branches. For example, suppose you wanted to propose two bug fixes that are not related to each other. In that case, it is more appropriate to send two separate PRs so that each fix can be reviewed, refined, and merged independently. But if you send PRs using the master branch only, both fixes (and any other change you do in the master branch) will appear in the PRs you create from it.

To create another PR while the current PR is still under review, create a new branch (remember to switch back to the master branch first), add your new proposed change in that branch, and create a new PR following the steps given above.

It is possible to create PRs within the same repo e.g., you can create a PR from branch feature-x to the master branch, within the same repo. Doing so will allow the code to be reviewed by other developers (using PR review mechanism) before it is merged.

JavaDoc is a tool for generating API documentation in HTML format from comments in the source code. In addition, modern IDEs use JavaDoc comments to generate explanatory tooltips.

/**
 * Returns an Image object that can then be painted on the screen.
 * The url argument must specify an absolute {@link URL}. The name
 * argument is a specifier that is relative to the url argument.
 * <p>
 * This method always returns immediately, whether or not the
 * image exists. When this applet attempts to draw the image on
 * the screen, the data will be loaded. The graphics primitives
 * that draw the image will incrementally paint on the screen.
 *
 * @param url an absolute URL giving the base location of the image
 * @param name the location of the image, relative to the url argument
 * @return the image at the specified URL
 * @see Image
 */
public Image getImage(URL url, String name) {
    try {
        return getImage(new URL(url, name));
    } catch (MalformedURLException e) {
        return null;
    }
}

In the absence of more extensive guidelines (e.g., given in a coding standard adopted by your project), you can follow the two examples below in your code.

A minimal JavaDoc comment example for methods:

/**
 * Returns lateral location of the specified position.
 * If the position is unset, NaN is returned.
 *
 * @param x X coordinate of position.
 * @param y Y coordinate of position.
 * @param zone Zone of position.
 * @return Lateral location.
 * @throws IllegalArgumentException If zone is <= 0.
 */
public double computeLocation(double x, double y, int zone)
    throws IllegalArgumentException {
    // ...
}

A minimal JavaDoc comment example for classes:

package ...

import ...

/**
 * Represents a location in a 2D space. A <code>Point</code> object corresponds to
 * a coordinate represented by two integers e.g., <code>3,6</code>
 */
public class Point {
    // ...
}

You can use the java.io.File class to represent a file object. It can be used to access properties of the file object.

import java.io.File;

public class FileClassDemo {

    public static void main(String[] args) {
        File f = new File("data/fruits.txt");
        System.out.println("full path: " + f.getAbsolutePath());
        System.out.println("file exists?: " + f.exists());
        System.out.println("is Directory?: " + f.isDirectory());
    }

}

full path: C:\sample-code\data\fruits.txt
file exists?: true
is Directory?: false

If you use backslash to specify the file path in a Windows computer, you need to use an additional backslash as an escape character because the backslash by itself has a special meaning. e.g., use "data\\fruits.txt", not "data\fruits.txt". Alternatively, you can use forward slash "data/fruits.txt" (even on Windows).

You can read from a file using a Scanner object that uses a File object as the source of data.

import java.io.File;
import java.io.FileNotFoundException;
import java.util.Scanner;

public class FileReadingDemo {

    private static void printFileContents(String filePath) throws FileNotFoundException {
        File f = new File(filePath); // create a File for the given file path
        Scanner s = new Scanner(f); // create a Scanner using the File as the source
        while (s.hasNext()) {
            System.out.println(s.nextLine());
        }
    }

    public static void main(String[] args) {
        try {
            printFileContents("data/fruits.txt");
        } catch (FileNotFoundException e) {
            System.out.println("File not found");
        }
    }

}

5 Apples
3 Bananas
6 Cherries

You can use a java.io.FileWriter object to write to a file.

import java.io.FileWriter;
import java.io.IOException;

public class FileWritingDemo {

    private static void writeToFile(String filePath, String textToAdd) throws IOException {
        FileWriter fw = new FileWriter(filePath);
        fw.write(textToAdd);
        fw.close();
    }

    public static void main(String[] args) {
        String file2 = "temp/lines.txt";
        try {
            writeToFile(file2, "first line" + System.lineSeparator() + "second line");
        } catch (IOException e) {
            System.out.println("Something went wrong: " + e.getMessage());
        }
    }

}

first line
second line

Note that you need to call the close() method of the FileWriter object for the writing operation to be completed.

You can create a FileWriter object that appends to the file (instead of overwriting the current content) by specifying an additional boolean parameter to the constructor.

private static void appendToFile(String filePath, String textToAppend) throws IOException {
    FileWriter fw = new FileWriter(filePath, true); // create a FileWriter in append mode
    fw.write(textToAppend);
    fw.close();
}

The java.nio.file.Files is a utility class that provides several useful file operations. It relies on the java.nio.file.Paths file to generate Path objects that represent file paths.

import java.io.IOException;
import java.nio.file.Files;
import java.nio.file.Paths;

public class FilesClassDemo {

    public static void main(String[] args) throws IOException{
        Files.copy(Paths.get("data/fruits.txt"), Paths.get("temp/fruits2.txt"));
        Files.delete(Paths.get("temp/fruits2.txt"));
    }

}

The techniques above are good enough to manipulate simple text files. Note that it is also possible to perform file I/O operations using other classes.

You can organize your types (i.e., classes, interfaces, enumerations, etc.) into packages for easier management (among other benefits).

To create a package, you put a package statement at the very top of every source file in that package. The package statement must be the first line in the source file and there can be no more than one package statement in each source file. Furthermore, the package of a type should match the folder path of the source file. Similarly, the compiler will put the .class files in a folder structure that matches the package names.

package seedu.tojava.util;

public class Formatter {
    public static final String PREFIX = ">>";

    public static String format(String s){
        return PREFIX + s;
    }
}

Package names are written in all lower case (not camelCase), using the dot as a separator. Packages in the Java language itself begin with java. or javax. Companies use their reversed Internet domain name to begin their package names.

To use a public types contained in the packagepackage member from outside its package, you must do one of the following:

1. Use the type name prefixed by the package name e.g., java.io.IOExceptionfully qualified name to refer to the member
2. Import the package or the specific package member

package seedu.tojava;

import seedu.tojava.util.StringParser;
import seedu.tojava.frontend.*;

public class Main {

    public static void main(String[] args) {

        // Using the fully qualified name to access the Processor class
        String status = seedu.tojava.logic.Processor.getStatus();

        // Using the StringParser previously imported
        StringParser sp = new StringParser();

        // Using classes from the tojava.frontend package
        Ui ui = new Ui();
        Message m = new Message();

    }
}

Importing a package does not import its sub-packages, as packages do not behave as hierarchies despite appearances.

If you do not use a package statement, your type doesn't have a package -- a practice not recommended (except for small code examples) as it is not possible for a type in a package to import a type that is not in a package.

Optionally, a static import can be used to import static members of a type so that the imported members can be used without specifying the type name.

import static seedu.tojava.util.Formatter.PREFIX;
import static seedu.tojava.util.Formatter.format;

public class Main {

    public static void main(String[] args) {

        String formatted = format("Hello");
        boolean isFormatted = formatted.startsWith(PREFIX);
        System.out.println(formatted);
    }
}

When using the commandline to compile/run Java, you should take the package into account.

Java applications are typically delivered as JAR (short for Java Archive) files. A JAR contains Java classes and other resources (icons, media files, etc.).

An executable JAR file can be launched using the java -jar command e.g., java -jar foo.jar launches the foo.jar file.

The IDE or build tools such as Gradle can help you to package your application as a JAR file.

See the tutorial Working with JAR files @se-edu/guides to learn how to create and use JAR files.

Always code as if the person who ends up maintaining your code will be a violent psychopath who knows where you live. _{-- Martin Golding}

Production code needs to be of high quality. Given how the world is becoming increasingly dependent on software, poor quality code is something no one can afford to tolerate.

One essential way to improve code quality is to follow a consistent style. That is why software engineers follow a strict coding standard (aka style guide).

The aim of a coding standard is to make the entire code base look like it was written by one person. A coding standard is usually specific to a programming language and specifies guidelines such as the locations of opening and closing braces, indentation styles and naming styles (e.g. whether to use Hungarian style, Pascal casing, Camel casing, etc.). It is important that the whole team/company uses the same coding standard and that the standard is generally not inconsistent with typical industry practices. If a company's coding standard is very different from what is typically used in the industry, new recruits will take longer to get used to the company's coding style.

IDEs can help to enforce some parts of a coding standard e.g. indentation rules.

Developer testing is the testing done by the developers themselves as opposed to professional testers or end-users.

Delaying testing until the full product is complete has a number of disadvantages:

• Locating the cause of a test case failure is difficult due to a large search space; in a large system, the search space could be millions of lines of code, written by hundreds of developers! The failure may also be due to multiple inter-related bugs.
• Fixing a bug found during such testing could result in major rework, especially if the bug originated from the design or during requirements specification i.e. a faulty design or faulty requirements.
• One bug might 'hide' other bugs, which could emerge only after the first bug is fixed.
• The delivery may have to be delayed if too many bugs are found during testing.

Therefore, it is better to do early testing, as hinted by the popular rule of thumb given below, also illustrated by the graph below it.

The earlier a bug is found, the easier and cheaper to have it fixed.

Such early testing of partially developed software is usually, and by necessity, done by the developers themselves i.e. developer testing.

A test driver is the code that ‘drives’ the Software Under TestSUT for the purpose of testing i.e. invoking the SUT with test inputs and verifying if the behavior is as expected.

public class PayrollTest {
    public static void main(String[] args) throws Exception {

        // test setup
        Payroll p = new Payroll();

        // test case 1
        p.setEmployees(new String[]{"E001", "E002"});
        // automatically verify the response
        if (p.totalSalary() != 6400) {
            throw new Error("case 1 failed ");
        }

        // test case 2
        p.setEmployees(new String[]{"E001"});
        if (p.totalSalary() != 2300) {
            throw new Error("case 2 failed ");
        }

        // more tests...

        System.out.println("All tests passed");
    }
}

JUnit is a tool for automated testing of Java programs. Similar tools are available for other languages and for automating different types of testing.

@Test
public void testTotalSalary() {
    Payroll p = new Payroll();

    // test case 1
    p.setEmployees(new String[]{"E001", "E002"});
    assertEquals(6400, p.totalSalary());

    // test case 2
    p.setEmployees(new String[]{"E001"});
    assertEquals(2300, p.totalSalary());

    // more tests...
}

Most modern IDEs have integrated support for testing tools. The figure below shows the JUnit output when running some JUnit tests using the Eclipse IDE.

In OOP code, it is common to write one or more unit tests for each public method of a class.

class Foo {
    String read() {
        // ...
    }
    
    void write(String input) {
        // ...
    }
    
}

class FooTest {
    
    @Test
    void read() {
        // a unit test for Foo#read() method
    }
    
    @Test
    void write_emptyInput_exceptionThrown() {
        // a unit tests for Foo#write(String) method
    }  
    
    @Test
    void write_normalInput_writtenCorrectly() {
        // another unit tests for Foo#write(String) method
    }
}

import unittest

class Foo:
  def read(self):
      # ...
  
  def write(self, input):
      # ...


class FooTest(unittest.TestCase):
  
  def test_read(self):
      # a unit test for read() method
  
  def test_write_emptyIntput_ignored(self):
      # a unit test for write(string) method
  
  def test_write_normalInput_writtenCorrectly(self):
      # another unit test for write(string) method

When writing JUnit tests for a class Foo, the common practice is to create a FooTest class, which will contain various test methods.

public class IntPair {
    int first;
    int second;

    public IntPair(int first, int second) {
        this.first = first;
        this.second = second;
    }

    public int intDivision() throws Exception {
        if (second == 0){
            throw new Exception("Divisor is zero");
        }
        return first/second;
    }

    @Override
    public String toString() {
        return first + "," + second;
    }
}

import org.junit.jupiter.api.Test;

import static org.junit.jupiter.api.Assertions.assertEquals;
import static org.junit.jupiter.api.Assertions.fail;

public class IntPairTest {


    @Test
    public void testStringConversion() {
        assertEquals("4,7", new IntPair(4, 7).toString());
    }

    @Test
    public void intDivision_nonZeroDivisor_success() throws Exception {
        assertEquals(2, new IntPair(4, 2).intDivision());
        assertEquals(0, new IntPair(1, 2).intDivision());
        assertEquals(0, new IntPair(0, 5).intDivision());
    }

    @Test
    public void intDivision_zeroDivisor_exceptionThrown() {
        try {
            assertEquals(0, new IntPair(1, 0).intDivision());
            fail(); // the test should not reach this line
        } catch (Exception e) {
            assertEquals("Divisor is zero", e.getMessage());
        }
    }
}

Notes:

• Each test method is marked with a @Test annotation.
• Tests use Assert.assertEquals(expected, actual) methods to compare the expected output with the actual output. If they do not match, the test will fail. JUnit comes with other similar methods such as Assert.assertNull and Assert.assertTrue.
• Java code normally use camelCase for method names e.g., testStringConversion but when writing test methods, sometimes another convention is used: whatIsBeingTested_descriptionOfTestInputs_expectedOutcome e.g., intDivision_zeroDivisor_exceptionThrown
• There are several ways to verify the code throws the correct exception. The third test method in the example above shows one of the simpler methods. If the exception is thrown, it will be caught and further verified inside the catch block. But if it is not thrown as expected, the test will reach Assert.fail() line and will fail as a result.
• The easiest way to run JUnit tests is to do it via the IDE. For example, in Intellij you can right-click the folder containing test classes and choose 'Run all tests...'

A proper unit test requires the unit to be tested in isolation so that bugs in the code the unit depends ondependencies cannot influence the test i.e. bugs outside of the unit should not affect the unit tests.

Stubs can isolate the Software Under Test (in this case, the unit being tested)SUT from its dependencies.

class Logic {
    Storage s;

    Logic(Storage s) {
        this.s = s;
    }

    String getName(int index) {
        return "Name: " + s.getName(index);
    }
}

interface Storage {
    String getName(int index);
}

class DatabaseStorage implements Storage {

    @Override
    public String getName(int index) {
        return readValueFromDatabase(index);
    }

    private String readValueFromDatabase(int index) {
        // retrieve name from the database
    }
}

Logic logic = new Logic(new DatabaseStorage());
String name = logic.getName(23);

@Test
void getName() {
    Logic logic = new Logic(new DatabaseStorage());
    assertEquals("Name: John", logic.getName(5));
}

class StorageStub implements Storage {

    @Override
    public String getName(int index) {
        if (index == 5) {
            return "Adam";
        } else {
            throw new UnsupportedOperationException();
        }
    }
}

@Test
void getName() {
    Logic logic = new Logic(new StorageStub());
    assertEquals("Name: Adam", logic.getName(5));
}

In addition to Stubs, there are other type of replacements you can use during testing, e.g. Mocks, Fakes, Dummies, Spies.

Skim through the JUnit 5 User Guide to see what advanced techniques are available. If applicable, feel free to adopt them.